GAMBIT
latest
  • Installation and Setup
  • Tutorial
  • Command Line Interface
  • Reference database releases
  • Python API
    • K-mer signatures
    • Distance Metric
    • Database
    • Taxonomic Classification and Database Queries
    • Results export
    • Command Line Interface
    • Miscellaneous and Utility Code
GAMBIT
  • Python API
  • Edit on GitHub

Python API

  • K-mer signatures
    • gambit.seq
    • gambit.kmers
    • gambit.sigs
    • gambit.sigs.base
    • gambit.sigs.calc
    • gambit.sigs.convert
    • gambit.sigs.hdf5
  • Distance Metric
    • gambit.metric
  • Database
    • gambit.db
    • gambit.db.refdb
    • gambit.db.models
    • gambit.db.sqla
    • gambit.db.migrate
  • Taxonomic Classification and Database Queries
    • gambit.classify
    • gambit.query
  • Results export
    • gambit.results
    • gambit.results.base
    • gambit.results.json
    • gambit.results.csv
    • gambit.results.archive
  • Command Line Interface
    • gambit.cli
    • gambit.cli.common
    • gambit.cli.root
    • gambit.cli.query
    • gambit.cli.signatures
    • gambit.cli.debug
  • Miscellaneous and Utility Code
    • gambit.util
    • gambit.util.misc
    • gambit.util.typing
    • gambit.util.io
    • gambit.util.json
    • gambit.util.indexing
    • gambit.util.progress
    • gambit.util.dev
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© Copyright 2021, Jared Lumpe. Revision 8d781727.

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